SubtiBank SubtiBank
yrkA [2017-05-02 12:36:24]
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yrkA [2017-05-02 12:36:24]

unknown
locus
BSU26610
pI
4.92
mw
48.82 kDa
protein length
434 aa Sequence Blast
gene length
1302 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.3|Homeostasis] → [category|SW 1.3.1|Metal ion homeostasis (K, Na, Ca, Mg)] → [category|SW 1.3.1.1|Magnesium uptake/ efflux]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    2,718,959 → 2,720,263

    The protein

    Protein family

  • UPF0053 family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|BE0777DE7C40825D4DB7252EA84AAB3892578529|MpfA], [protein|B2E9D026B668C8530C406353E3400059388566FB|YhdT], [protein|E53B8D437B848B637AEC8C1BB9428EC8B6EB280E|YqhB], [protein|A459410312A926365B45CEB4694DE399B38820A2|YugS]

    • [SW|Domains]

  • [SW|DUF21 domain] (5-201)
  • 2 [SW|CBS domain]s (220-282, 289-346)

    • Structure

  • [PDB|4HG0] (CorC from E. coli, corresponds to the CBS domains and the C-terminal transporter-associated domain)

    • Expression and Regulation

    Operons

    genes
    [gene|45F03AB13292BBF0554785C7C02FE29033EDD742|yrkA]
    description
    [Pubmed|22383849]
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    Biological materials

    Expression vector

  • pGP2932 (N-terminal His-tag, purification from ''E. coli'', in [SW|pWH844]), available in [SW|Jörg Stülke]'s lab

    • References

  • 27933050